| Commit message (Collapse) | Author | Age | Files | Lines |
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Count string_list items in size_t, not "unsigned int".
* ab/string-list-count-in-size-t:
string-list API: change "nr" and "alloc" to "size_t"
gettext API users: don't explicitly cast ngettext()'s "n"
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Change the "nr" and "alloc" members of "struct string_list" to use
"size_t" instead of "nr". On some platforms the size of an "unsigned
int" will be smaller than a "size_t", e.g. a 32 bit unsigned v.s. 64
bit unsigned. As "struct string_list" is a generic API we use in a lot
of places this might cause overflows.
As one example: code in "refs.c" keeps track of the number of refs
with a "size_t", and auxiliary code in builtin/remote.c in
get_ref_states() appends those to a "struct string_list".
While we're at it split the "nr" and "alloc" in string-list.h across
two lines, which is the case for most such struct member
declarations (e.g. in "strbuf.h" and "strvec.h").
Changing e.g. "int i" to "size_t i" in run_and_feed_hook() isn't
strictly necessary, and there are a lot more cases where we'll use a
local "int", "unsigned int" etc. variable derived from the "nr" in the
"struct string_list". But in that case as well as
add_wrapped_shortlog_msg() in builtin/shortlog.c we need to adjust the
printf format referring to "nr" anyway, so let's also change the other
variables referring to it.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Fixes to the way generation number v2 in the commit-graph files are
(not) handled.
* ds/commit-graph-gen-v2-fixes:
commit-graph: declare bankruptcy on GDAT chunks
commit-graph: fix generation number v2 overflow values
commit-graph: start parsing generation v2 (again)
commit-graph: fix ordering bug in generation numbers
t5318: extract helpers to lib-commit-graph.sh
test-read-graph: include extra post-parse info
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The Generation Data (GDAT) and Generation Data Overflow (GDOV) chunks
store corrected commit date offsets, used for generation number v2.
Recent changes have demonstrated that previous versions of Git were
incorrectly parsing data from these chunks, but might have also been
writing them incorrectly.
I asserted [1] that the previous fixes were sufficient because the known
reasons for incorrectly writing generation number v2 data relied on
parsing the information incorrectly out of a commit-graph file, but the
previous versions of Git were not reading the generation number v2 data.
However, Patrick demonstrated [2] a case where in split commit-graphs
across an alternate boundary (and possibly some other special
conditions) it was possible to have a commit-graph that was generated by
a previous version of Git have incorrect generation number v2 data which
results in errors like the following:
commit-graph generation for commit <oid> is 1623273624 < 1623273710
[1] https://lore.kernel.org/git/f50e74f0-9ffa-f4f2-4663-269801495ed3@github.com/
[2] https://lore.kernel.org/git/Yh93vOkt2DkrGPh2@ncase/
Clearly, there is something else going on. The situation is not
completely understood, but the errors do not reproduce if the
commit-graphs are all generated by a Git version including these recent
fixes.
If we cannot trust the existing data in the GDAT and GDOV chunks, then
we can alter the format to change the chunk IDs for these chunks. This
causes the new version of Git to silently ignore the older chunks (and
disabling generation number v2 in the process) while writing new
commit-graph files with correct data in the GDA2 and GDO2 chunks.
Update commit-graph-format.txt including a historical note about these
deprecated chunks.
Reported-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The Generation Data Chunk was implemented and tested in e8b63005c
(commit-graph: implement generation data chunk, 2021-01-16), but the
test was carefully constructed to work on systems with 32-bit dates.
Since the corrected commit date offsets still required more than 31
bits, this triggered writing the generation_data_overflow chunk.
However, upon closer look, the
write_graph_chunk_generation_data_overflow() method writes the offsets
to the chunk (as dictated by the format) but fill_commit_graph_info()
treats the value in the chunk as if it is the full corrected commit date
(not an offset). For some reason, this does not cause an issue when
using the FUTURE_DATE specified in t5318-commit-graph.sh, but it does
show up as a failure in 'git commit-graph verify' if we increase that
FUTURE_DATE to be above four billion.
Fix this error and create a 64-bit timestamp version of the test so we
can test these larger values.
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The 'read_generation_data' member of 'struct commit_graph' was
introduced by 1fdc383c5 (commit-graph: use generation v2 only if entire
chain does, 2021-01-16). The intention was to avoid using corrected
commit dates if not all layers of a commit-graph had that data stored.
The logic in validate_mixed_generation_chain() at that point incorrectly
initialized read_generation_data to 1 if and only if the tip
commit-graph contained the Corrected Commit Date chunk.
This was "fixed" in 448a39e65 (commit-graph: validate layers for
generation data, 2021-02-02) to validate that read_generation_data was
either non-zero for all layers, or it would set read_generation_data to
zero for all layers.
The problem here is that read_generation_data is not initialized to be
non-zero anywhere!
This change initializes read_generation_data immediately after the chunk
is parsed, so each layer will have its value present as soon as
possible.
The read_generation_data member is used in fill_commit_graph_info() to
determine if we should use the corrected commit date or the topological
levels stored in the Commit Data chunk. Due to this bug, all previous
versions of Git were defaulting to topological levels in all cases!
This can be measured with some performance tests. Using the Linux kernel
as a testbed, I generated a complete commit-graph containing corrected
commit dates and tested the 'new' version against the previous, 'old'
version.
First, rev-list with --topo-order demonstrates a 26% improvement using
corrected commit dates:
hyperfine \
-n "old" "$OLD_GIT rev-list --topo-order -1000 v3.6" \
-n "new" "$NEW_GIT rev-list --topo-order -1000 v3.6" \
--warmup=10
Benchmark 1: old
Time (mean ± σ): 57.1 ms ± 3.1 ms
Range (min … max): 52.9 ms … 62.0 ms 55 runs
Benchmark 2: new
Time (mean ± σ): 45.5 ms ± 3.3 ms
Range (min … max): 39.9 ms … 51.7 ms 59 runs
Summary
'new' ran
1.26 ± 0.11 times faster than 'old'
These performance improvements are due to the algorithmic improvements
given by walking fewer commits due to the higher cutoffs from corrected
commit dates.
However, this comes at a cost. The additional I/O cost of parsing the
corrected commit dates is visible in case of merge-base commands that do
not reduce the overall number of walked commits.
hyperfine \
-n "old" "$OLD_GIT merge-base v4.8 v4.9" \
-n "new" "$NEW_GIT merge-base v4.8 v4.9" \
--warmup=10
Benchmark 1: old
Time (mean ± σ): 110.4 ms ± 6.4 ms
Range (min … max): 96.0 ms … 118.3 ms 25 runs
Benchmark 2: new
Time (mean ± σ): 150.7 ms ± 1.1 ms
Range (min … max): 149.3 ms … 153.4 ms 19 runs
Summary
'old' ran
1.36 ± 0.08 times faster than 'new'
Performance issues like this are what motivated 702110aac (commit-graph:
use config to specify generation type, 2021-02-25).
In the future, we could fix this performance problem by inserting the
corrected commit date offsets into the Commit Date chunk instead of
having that data in an extra chunk.
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When computing the generation numbers for a commit-graph, we compute
the corrected commit dates and then check if their offsets from the
actual dates is too large to fit in the 32-bit Generation Data chunk.
However, there is a problem with this approach: if we have parsed the
generation data from the previous commit-graph, then we continue the
loop because the corrected commit date is already computed. This causes
an under-count in the number of overflow values.
It is incorrect to add an increment to num_generation_data_overflows
next to this 'continue' statement, because we might start
double-counting commits that are computed because of the depth-first
search walk from a commit with an earlier OID.
Instead, iterate over the full commit list at the end, checking the
offsets to see how many grow beyond the maximum value.
Create a new t5328-commit-graph-64-bit-time.sh test script to handle
special cases of testing 64-bit timestamps. This helps demonstrate this
bug in more cases. It still won't hit all potential cases until the next
change, which reenables reading generation numbers. Use the skip_all
trick from 0a2bfccb9c8 (t0051: use "skip_all" under !MINGW in
single-test file, 2022-02-04) to make the output clean when run on a
32-bit system.
Helped-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Derrick Stolee <derrickstolee@github.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Fix a memory leak in code added in 6c622f9f0bb (commit-graph: write
commit-graph chains, 2019-06-18). We needed to free the "lock_name" if
we encounter errors, and the "graph_name" after we'd run unlink() on
it.
For the case of write_commit_graph_file() refactoring the code to free
the "lock_name" after we were done using the "struct lock_file lk"
would have made the control flow more complex. Luckily we can free the
"lock_file" right after the hold_lock_file_for_update() call, if it
makes use of "path" at all it'll have copied its contents to a "struct
strbuf" of its own.
While I'm at it let's fix code added in fb10ca5b543 (sparse-checkout:
write using lockfile, 2019-11-21) in write_patterns_and_update() to
avoid the same complexity that I thought I needed when I wrote the
initial fix for write_commit_graph_file(). We can free the
"sparse_filename" right after calling hold_lock_file_for_update(), we
don't need to wait until we're exiting the function to do so.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Fix a bug in fill_oids_from_packs(), we should always stop_progress(),
but did not do so if we returned an error here. This also plugs a
memory leak in those cases by releasing the two "struct strbuf"
variables the function uses.
While I'm at it stop hardcoding "-1" here and just use the return
value of error() instead, which happens to be "-1".
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When this code was migrated to the string_list API in
d88b14b3fd6 (commit-graph: use string-list API for input, 2018-06-27)
it was made to use used both STRING_LIST_INIT_NODUP and a
strbuf_detach() pattern.
Those should not be used together if string_list_clear() is expected
to free the memory, instead we need to either use STRING_LIST_INIT_DUP
with a string_list_append_nodup(), or a STRING_LIST_INIT_NODUP and
manually fiddle with the "strdup_strings" member before calling
string_list_clear(). Let's do the former.
Since "strdup_strings = 1" is set now other code might be broken by
relying on "pack_indexes" not to duplicate it strings, but that
doesn't happen. When we pass this down to write_commit_graph() that
code uses the "struct string_list" without modifying it. Let's add a
"const" to the variable to have the compiler enforce that assumption.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Return early if git directory does not exist. This will protect against
test failures in the upcoming change to BUG in prepare_repo_settings if no
git directory exists.
Signed-off-by: Lessley Dennington <lessleydennington@gmail.com>
Reviewed-by: Elijah Newren <newren@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The run-command API has been updated so that the callers can easily
ask the file descriptors open for packfiles to be closed immediately
before spawning commands that may trigger auto-gc.
* js/run-command-close-packs:
Close object store closer to spawning child processes
run_auto_maintenance(): implicitly close the object store
run-command: offer to close the object store before running
run-command: prettify the `RUN_COMMAND_*` flags
pull: release packs before fetching
commit-graph: when closing the graph, also release the slab
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The slab has information about the commit graph. That means that it is
meaningless (and even misleading) when the commit graph was closed.
This seems not to matter currently, but we're about to fix a
Windows-specific bug where `git pull` does not close the object store
before fetching (risking that an implicit auto-gc fails to remove the
now-obsolete pack file(s)), and once we have that bug fix in place, it
does matter: after that bug fix, we will open the object store, do some
stuff with it, then close it, fetch, and then open it again, and do more
stuff. If we close the commit graph without releasing the corresponding
slab, we're hit by a symptom like this in t5520.19:
BUG: commit-reach.c:85: bad generation skip 9223372036854775807
> 3 at 5cd378271655d43a3b4477520014f02213ad1546
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The code to show progress indicator in a few code paths did not
cover between 0-100%, which has been corrected.
* ab/progress-users-adjust-counters:
entry: show finer-grained counter in "Filtering content" progress line
commit-graph: fix bogus counter in "Scanning merged commits" progress line
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The final value of the counter of the "Scanning merged commits"
progress line is always one less than its expected total, e.g.:
Scanning merged commits: 83% (5/6), done.
This happens because while iterating over an array the loop variable
is passed to display_progress() as-is, but while C arrays (and thus
the loop variable) start at 0 and end at N-1, the progress counter
must end at N. Fix this by passing 'i + 1' to display_progress(), like
most other callsites do.
There's an RFC series to add a GIT_TEST_CHECK_PROGRESS=1 mode[1] which
catches this issue in the 'fetch.writeCommitGraph' and
'fetch.writeCommitGraph with submodules' tests in
't5510-fetch.sh'. The GIT_TEST_CHECK_PROGRESS=1 mode is not part of
this series, but future changes to progress.c may add it or similar
assertions to catch this and similar bugs elsewhere.
1. https://lore.kernel.org/git/20210620200303.2328957-1-szeder.dev@gmail.com/
Signed-off-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When queueing references in git-rev-list(1), we try to optimize parsing
of commits via the commit-graph. To do so, we first look up the object's
type, and if it is a commit we call `repo_parse_commit()` instead of
`parse_object()`. This is quite inefficient though given that we're
always uncompressing the object header in order to determine the type.
Instead, we can opportunistically search the commit-graph for the object
ID: in case it's found, we know it's a commit and can directly fill in
the commit object without having to uncompress the object header.
Expose a new function `lookup_commit_in_graph()`, which tries to find a
commit in the commit-graph by ID, and convert `get_reference()` to use
this function. This provides a big performance win in cases where we
load references in a repository with lots of references pointing to
commits. The following has been executed in a real-world repository with
about 2.2 million refs:
Benchmark #1: HEAD~: rev-list --unsorted-input --objects --quiet --not --all --not $newrev
Time (mean ± σ): 4.458 s ± 0.044 s [User: 4.115 s, System: 0.342 s]
Range (min … max): 4.409 s … 4.534 s 10 runs
Benchmark #2: HEAD: rev-list --unsorted-input --objects --quiet --not --all --not $newrev
Time (mean ± σ): 3.089 s ± 0.015 s [User: 2.768 s, System: 0.321 s]
Range (min … max): 3.061 s … 3.105 s 10 runs
Summary
'HEAD: rev-list --unsorted-input --objects --quiet --not --all --not $newrev' ran
1.44 ± 0.02 times faster than 'HEAD~: rev-list --unsorted-input --objects --quiet --not --all --not $newrev'
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The function `find_commit_in_graph()` assumes that the caller has passed
an object which was already determined to be a commit given that it will
access the commit's graph position, which is stored in a commit slab. In
a subsequent patch, we want to search for an object ID though without
knowing whether it is a commit or not, which is not currently possible.
Split out the logic to search the commit graph for a given object ID to
prepare for this change. This commit also renames the function to
`find_commit_pos_in_graph()`, which more accurately reflects what this
function does. Furthermore, in order to allow for the searched object ID
to be const, we need to adjust `bsearch_graph()`'s signature to accept a
constant object ID as input, too.
Signed-off-by: Patrick Steinhardt <ps@pks.im>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Many "printf"-like helper functions we have have been annotated
with __attribute__() to catch placeholder/parameter mismatches.
* ab/attribute-format:
advice.h: add missing __attribute__((format)) & fix usage
*.h: add a few missing __attribute__((format))
*.c static functions: add missing __attribute__((format))
sequencer.c: move static function to avoid forward decl
*.c static functions: don't forward-declare __attribute__
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Add missing __attribute__((format)) function attributes to various
"static" functions that take printf arguments.
Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Rewrite an existing caller in `git commit-graph verify` to take
advantage of checksum_valid().
Note that the replacement isn't a verbatim cut-and-paste, since the new
function avoids using hashfile at all and instead talks to the_hash_algo
directly, but it is functionally equivalent.
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The idea behind struct object_id is that it is supposed to represent the
identifier of a standard Git object or a special pseudo-object like the
all-zeros object ID. In this case, we have file hashes, which, while
similar, are distinct from the identifiers of objects.
Switch these code paths to use an unsigned char array. This is both
more logically consistent and it means that we need not set the
algorithm identifier for the struct object_id.
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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In the future, we'll want oidread to automatically set the hash
algorithm member for an object ID we read into it, so ensure we use
oidread instead of hashcpy everywhere we're copying a hash value into a
struct object_id.
Signed-off-by: brian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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A new configuration variable has been introduced to allow choosing
which version of the generation number gets used in the
commit-graph file.
* ds/commit-graph-generation-config:
commit-graph: use config to specify generation type
commit-graph: create local repository pointer
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We have two established generation number versions:
1: topological levels
2: corrected commit dates
The corrected commit dates are enabled by default, but they also write
extra data in the GDAT and GDOV chunks. Services that host Git data
might want to have more control over when this feature rolls out than
just updating the Git binaries.
Add a new "commitGraph.generationVersion" config option that specifies
the intended generation number version. If this value is less than 2,
then the GDAT chunk is never written _or read_ from an existing file.
This can replace our use of the GIT_TEST_COMMIT_GRAPH_NO_GDAT
environment variable in the test suite. Remove it.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The write_commit_graph() method uses 'the_repository' in a few places. A
new need for a repository pointer is coming in the following change, so
group these instances into a local variable 'r' that could eventually
become part of the method signature, if so desired.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Add and apply a semantic patch for converting code that open-codes
CALLOC_ARRAY to use it instead. It shortens the code and infers the
element size automatically.
Signed-off-by: René Scharfe <l.s.r@web.de>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The common code to deal with "chunked file format" that is shared
by the multi-pack-index and commit-graph files have been factored
out, to help codepaths for both filetypes to become more robust.
* ds/chunked-file-api:
commit-graph.c: display correct number of chunks when writing
chunk-format: add technical docs
chunk-format: restore duplicate chunk checks
midx: use 64-bit multiplication for chunk sizes
midx: use chunk-format read API
commit-graph: use chunk-format read API
chunk-format: create read chunk API
midx: use chunk-format API in write_midx_internal()
midx: drop chunk progress during write
midx: return success/failure in chunk write methods
midx: add num_large_offsets to write_midx_context
midx: add pack_perm to write_midx_context
midx: add entries to write_midx_context
midx: use context in write_midx_pack_names()
midx: rename pack_info to write_midx_context
commit-graph: use chunk-format write API
chunk-format: create chunk format write API
commit-graph: anonymize data in chunk_write_fn
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When writing a commit-graph, a progress meter is shown which indicates
the number of pieces of data to write (one per commit in each chunk).
In 47410aa837 (commit-graph: use chunk-format write API, 2021-02-18),
the number of chunks became tracked by the new chunk-format API. But a
stray local variable was left behind from when write_commit_graph_file()
used to keep track of the same.
Since this was no longer updated after 47410aa837, the progress meter
appeared broken:
$ git commit-graph write --reachable
Expanding reachable commits in commit graph: 837569, done.
Writing out commit graph in 3 passes: 166% (4187845/2512707), done.
Drop the local variable and rely instead on the chunk-format API to tell
us the correct number of chunks.
Reported-by: SZEDER Gábor <szeder.dev@gmail.com>
Signed-off-by: Taylor Blau <me@ttaylorr.com>
Acked-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Instead of parsing the table of contents directly, use the chunk-format
API methods read_table_of_contents() and pair_chunk(). While the current
implementation loses the duplicate-chunk detection, that will be added
in a future change.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The commit-graph write logic is ready to make use of the chunk-format
write API. Each chunk write method is already in the correct prototype.
We only need to use the 'struct chunkfile' pointer and the correct API
calls.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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In preparation for creating an API around file formats using chunks and
tables of contents, prepare the commit-graph write code to use
prototypes that will match this new API.
Specifically, convert chunk_write_fn to take a "void *data" parameter
instead of the commit-graph-specific "struct write_commit_graph_context"
pointer.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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* js/commit-graph-warning:
Revert "commit-graph: when incompatible with graphs, indicate why"
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This reverts commit c85eec7fc37e1ca79072f263ae6ea1ee305ba38c, as
it is a bit overzealous, we are in prerelease freeze, and we want
to have enough time to get this right and cook in 'next'.
cf. <8735xgkvuo.fsf@evledraar.gmail.com>
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write_commit_graph initialises topo_levels using init_topo_level_slab(),
next it calls compute_topological_levels() which can cause the slab to
grow, we therefore need to clear the slab again using
clear_topo_level_slab() when we're done.
First introduced in 72a2bfca (commit-graph: add a slab to store
topological levels, 2021-01-16).
LeakSanitizer output:
==1026==ERROR: LeakSanitizer: detected memory leaks
Direct leak of 8 byte(s) in 1 object(s) allocated from:
#0 0x498ae9 in realloc /src/llvm-project/compiler-rt/lib/asan/asan_malloc_linux.cpp:164:3
#1 0xafbed8 in xrealloc /src/git/wrapper.c:126:8
#2 0x7966d1 in topo_level_slab_at_peek /src/git/commit-graph.c:71:1
#3 0x7965e0 in topo_level_slab_at /src/git/commit-graph.c:71:1
#4 0x78fbf5 in compute_topological_levels /src/git/commit-graph.c:1472:12
#5 0x78c5c3 in write_commit_graph /src/git/commit-graph.c:2456:2
#6 0x535c5f in graph_write /src/git/builtin/commit-graph.c:299:6
#7 0x5350ca in cmd_commit_graph /src/git/builtin/commit-graph.c:337:11
#8 0x4cddb1 in run_builtin /src/git/git.c:453:11
#9 0x4cabe2 in handle_builtin /src/git/git.c:704:3
#10 0x4cd084 in run_argv /src/git/git.c:771:4
#11 0x4ca424 in cmd_main /src/git/git.c:902:19
#12 0x707fb6 in main /src/git/common-main.c:52:11
#13 0x7fee4249383f in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x2083f)
Indirect leak of 524256 byte(s) in 1 object(s) allocated from:
#0 0x498942 in calloc /src/llvm-project/compiler-rt/lib/asan/asan_malloc_linux.cpp:154:3
#1 0xafc088 in xcalloc /src/git/wrapper.c:140:8
#2 0x796870 in topo_level_slab_at_peek /src/git/commit-graph.c:71:1
#3 0x7965e0 in topo_level_slab_at /src/git/commit-graph.c:71:1
#4 0x78fbf5 in compute_topological_levels /src/git/commit-graph.c:1472:12
#5 0x78c5c3 in write_commit_graph /src/git/commit-graph.c:2456:2
#6 0x535c5f in graph_write /src/git/builtin/commit-graph.c:299:6
#7 0x5350ca in cmd_commit_graph /src/git/builtin/commit-graph.c:337:11
#8 0x4cddb1 in run_builtin /src/git/git.c:453:11
#9 0x4cabe2 in handle_builtin /src/git/git.c:704:3
#10 0x4cd084 in run_argv /src/git/git.c:771:4
#11 0x4ca424 in cmd_main /src/git/git.c:902:19
#12 0x707fb6 in main /src/git/common-main.c:52:11
#13 0x7fee4249383f in __libc_start_main (/lib/x86_64-linux-gnu/libc.so.6+0x2083f)
SUMMARY: AddressSanitizer: 524264 byte(s) leaked in 2 allocation(s).
Signed-off-by: Andrzej Hunt <ajrhunt@google.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When certain features (e.g. grafts) used in the repository are
incompatible with the use of the commit-graph, we used to silently
turned commit-graph off; we now tell the user what we are doing.
* js/commit-graph-warning:
commit-graph: when incompatible with graphs, indicate why
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When `gc.writeCommitGraph = true`, it is possible that the commit-graph
is _still_ not written: replace objects, grafts and shallow repositories
are incompatible with the commit-graph feature.
Under such circumstances, we need to indicate to the user why the
commit-graph was not written instead of staying silent about it.
Signed-off-by: Johannes Schindelin <johannes.schindelin@gmx.de>
Acked-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Fix incremental update of commit-graph file around corrected commit
date data.
* ds/commit-graph-genno-fix:
commit-graph: prepare commit graph
commit-graph: be extra careful about mixed generations
commit-graph: compute generations separately
commit-graph: validate layers for generation data
commit-graph: always parse before commit_graph_data_at()
commit-graph: use repo_parse_commit
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Before checking if the repository has a commit-graph loaded, be sure
to run prepare_commit_graph(). This is necessary because otherwise
the topo_levels slab is not initialized. As we compute topo_levels for
the new commits, we iterate further into the lower layers since the
first visit to each commit looks as though the topo_level is not
populated.
By properly initializing the topo_slab, we fix the previously broken
case of a split commit graph where a base layer has the
generation_data_overflow chunk.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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When upgrading to a commit-graph with corrected commit dates from
one without, there are a few things that need to be considered.
When computing generation numbers for the new commit-graph file that
expects to add the generation_data chunk with corrected commit
dates, we need to ensure that the 'generation' member of the
commit_graph_data struct is set to zero for these commits.
Unfortunately, the fallback to use topological level for generation
number when corrected commit dates are not available are causing us
harm here: parsing commits notices that read_generation_data is
false and populates 'generation' with the topological level.
The solution is to iterate through the commits, parse the commits
to populate initial values, then reset the generation values to
zero to trigger recalculation. This loop only occurs when the
existing commit-graph data has no corrected commit dates.
While this improves our situation somewhat, we have not completely
solved the issue for correctly computing generation numbers for mixed
layers. That follows in the next change.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The compute_generation_numbers() method was introduced by 3258c663
(commit-graph: compute generation numbers, 2018-05-01) to compute what
is now known as "topological levels". These are still stored in the
commit-graph file for compatibility sake while c1a09119 (commit-graph:
implement corrected commit date, 2021-01-16) updated the method to also
compute the new version of generation numbers: corrected commit date.
It makes sense why these are grouped. They perform very similar walks of
the necessary commits and compute similar maximums over each parent.
However, having these two together conflates them in subtle ways that is
hard to separate.
In particular, the topo_level slab is used to store the topological
levels in all cases, but the commit_graph_data_at(c)->generation member
stores different values depending on the state of the existing
commit-graph file.
* If the existing commit-graph file has a "GDAT" chunk, then these
values represent corrected commit dates.
* If the existing commit-graph file doesn't have a "GDAT" chunk, then
these values are actually the topological levels.
This issue only occurs only when upgrading an existing commit-graph file
into one that has the "GDAT" chunk. The current change does not resolve
this upgrade problem, but splitting the implementation into two pieces
here helps with that process, which will follow in the next change.
The important thing this helps with is the case where the
num_generation_data_overflows was being incremented incorrectly,
triggering a write of the overflow chunk.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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We need to be extra careful that we don't use corrected
commit dates from any layer of a commit-graph chain if there is a
single commit-graph file that is missing the generation_data chunk.
Update validate_mixed_generation_chain() to correctly update each
layer to ignore the generation_data chunk in this case. It now also
returns 1 if all layers have a generation_data chunk. This return
value will be used in the next change.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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There is a subtle failure happening when computing corrected commit
dates with --split enabled. It requires a base layer needing the
generation_data_overflow chunk. Then, the next layer on top
erroneously thinks it needs an overflow chunk due to a bug leading
to recalculating all reachable generation numbers. The output of
the failure is
BUG: commit-graph.c:1912: expected to write 8 bytes to
chunk 47444f56, but wrote 0 instead
These "expected" 8 bytes are due to re-computing the corrected
commit date for the lower layer but the new layer does not need
any overflow.
Add a test to t5318-commit-graph.sh that demonstrates this bug. However,
it does not trigger consistently with the existing code.
The generation number data is stored in a slab and accessed by
commit_graph_data_at(). This data is initialized when parsing a commit,
but is otherwise used assuming it has been populated. The loop in
compute_generation_numbers() did not enforce that all reachable
commits were parsed and had correct values. This could lead to some
problems when writing a commit-graph with corrected commit dates based
on a commit-graph without them.
It has been difficult to identify the issue here because it was so hard
to reproduce. It relies on this uninitialized data having a non-zero
value, but also on specifically in a way that overwrites the existing
data.
This patch adds the extra parse to ensure the data is filled before we
compute the generation number of a commit. This triggers the new test
to fail because the generation number overflow count does not match
between this computation and the write for that chunk.
The actual fix will follow as the next few changes.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The write_commit_graph_context has a repository pointer, so use it.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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The commit-graph learned to use corrected commit dates instead of
the generation number to help topological revision traversal.
* ak/corrected-commit-date:
doc: add corrected commit date info
commit-reach: use corrected commit dates in paint_down_to_common()
commit-graph: use generation v2 only if entire chain does
commit-graph: implement generation data chunk
commit-graph: implement corrected commit date
commit-graph: return 64-bit generation number
commit-graph: add a slab to store topological levels
t6600-test-reach: generalize *_three_modes
commit-graph: consolidate fill_commit_graph_info
revision: parse parent in indegree_walk_step()
commit-graph: fix regression when computing Bloom filters
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091f4cf (commit: don't use generation numbers if not needed,
2018-08-30) changed paint_down_to_common() to use commit dates instead
of generation numbers v1 (topological levels) as the performance
regressed on certain topologies. With generation number v2 (corrected
commit dates) implemented, we no longer have to rely on commit dates and
can use generation numbers.
For example, the command `git merge-base v4.8 v4.9` on the Linux
repository walks 167468 commits, taking 0.135s for committer date and
167496 commits, taking 0.157s for corrected committer date respectively.
While using corrected commit dates, Git walks nearly the same number of
commits as commit date, the process is slower as for each comparision we
have to access a commit-slab (for corrected committer date) instead of
accessing struct member (for committer date).
This change incidentally broke the fragile t6404-recursive-merge test.
t6404-recursive-merge sets up a unique repository where all commits have
the same committer date without a well-defined merge-base.
While running tests with GIT_TEST_COMMIT_GRAPH unset, we use committer
date as a heuristic in paint_down_to_common(). 6404.1 'combined merge
conflicts' merges commits in the order:
- Merge C with B to form an intermediate commit.
- Merge the intermediate commit with A.
With GIT_TEST_COMMIT_GRAPH=1, we write a commit-graph and subsequently
use the corrected committer date, which changes the order in which
commits are merged:
- Merge A with B to form an intermediate commit.
- Merge the intermediate commit with C.
While resulting repositories are equivalent, 6404.4 'virtual trees were
processed' fails with GIT_TEST_COMMIT_GRAPH=1 as we are selecting
different merge-bases and thus have different object ids for the
intermediate commits.
As this has already causes problems (as noted in 859fdc0 (commit-graph:
define GIT_TEST_COMMIT_GRAPH, 2018-08-29)), we disable commit graph
within t6404-recursive-merge.
Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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Since there are released versions of Git that understand generation
numbers in the commit-graph's CDAT chunk but do not understand the GDAT
chunk, the following scenario is possible:
1. "New" Git writes a commit-graph with the GDAT chunk.
2. "Old" Git writes a split commit-graph on top without a GDAT chunk.
If each layer of split commit-graph is treated independently, as it was
the case before this commit, with Git inspecting only the current layer
for chunk_generation_data pointer, commits in the lower layer (one with
GDAT) whould have corrected commit date as their generation number,
while commits in the upper layer would have topological levels as their
generation. Corrected commit dates usually have much larger values than
topological levels. This means that if we take two commits, one from the
upper layer, and one reachable from it in the lower layer, then the
expectation that the generation of a parent is smaller than the
generation of a child would be violated.
It is difficult to expose this issue in a test. Since we _start_ with
artificially low generation numbers, any commit walk that prioritizes
generation numbers will walk all of the commits with high generation
number before walking the commits with low generation number. In all the
cases I tried, the commit-graph layers themselves "protect" any
incorrect behavior since none of the commits in the lower layer can
reach the commits in the upper layer.
This issue would manifest itself as a performance problem in this case,
especially with something like "git log --graph" since the low
generation numbers would cause the in-degree queue to walk all of the
commits in the lower layer before allowing the topo-order queue to write
anything to output (depending on the size of the upper layer).
Therefore, When writing the new layer in split commit-graph, we write a
GDAT chunk only if the topmost layer has a GDAT chunk. This guarantees
that if a layer has GDAT chunk, all lower layers must have a GDAT chunk
as well.
Rewriting layers follows similar approach: if the topmost layer below
the set of layers being rewritten (in the split commit-graph chain)
exists, and it does not contain GDAT chunk, then the result of rewrite
does not have GDAT chunks either.
Signed-off-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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As discovered by Ævar, we cannot increment graph version to
distinguish between generation numbers v1 and v2 [1]. Thus, one of
pre-requistes before implementing generation number v2 was to
distinguish between graph versions in a backwards compatible manner.
We are going to introduce a new chunk called Generation DATa chunk (or
GDAT). GDAT will store corrected committer date offsets whereas CDAT
will still store topological level.
Old Git does not understand GDAT chunk and would ignore it, reading
topological levels from CDAT. New Git can parse GDAT and take advantage
of newer generation numbers, falling back to topological levels when
GDAT chunk is missing (as it would happen with a commit-graph written
by old Git).
We introduce a test environment variable 'GIT_TEST_COMMIT_GRAPH_NO_GDAT'
which forces commit-graph file to be written without generation data
chunk to emulate a commit-graph file written by old Git.
To minimize the space required to store corrrected commit date, Git
stores corrected commit date offsets into the commit-graph file, instea
of corrected commit dates. This saves us 4 bytes per commit, decreasing
the GDAT chunk size by half, but it's possible for the offset to
overflow the 4-bytes allocated for storage. As such overflows are and
should be exceedingly rare, we use the following overflow management
scheme:
We introduce a new commit-graph chunk, Generation Data OVerflow ('GDOV')
to store corrected commit dates for commits with offsets greater than
GENERATION_NUMBER_V2_OFFSET_MAX.
If the offset is greater than GENERATION_NUMBER_V2_OFFSET_MAX, we set
the MSB of the offset and the other bits store the position of corrected
commit date in GDOV chunk, similar to how Extra Edge List is maintained.
We test the overflow-related code with the following repo history:
F - N - U
/ \
U - N - U N
\ /
N - F - N
Where the commits denoted by U have committer date of zero seconds
since Unix epoch, the commits denoted by N have committer date of
1112354055 (default committer date for the test suite) seconds since
Unix epoch and the commits denoted by F have committer date of
(2 ^ 31 - 2) seconds since Unix epoch.
The largest offset observed is 2 ^ 31, just large enough to overflow.
[1]: https://lore.kernel.org/git/87a7gdspo4.fsf@evledraar.gmail.com/
Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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With most of preparations done, let's implement corrected commit date.
The corrected commit date for a commit is defined as:
* A commit with no parents (a root commit) has corrected commit date
equal to its committer date.
* A commit with at least one parent has corrected commit date equal to
the maximum of its commit date and one more than the largest corrected
commit date among its parents.
As a special case, a root commit with timestamp of zero (01.01.1970
00:00:00Z) has corrected commit date of one, to be able to distinguish
from GENERATION_NUMBER_ZERO (that is, an uncomputed corrected commit
date).
To minimize the space required to store corrected commit date, Git
stores corrected commit date offsets into the commit-graph file. The
corrected commit date offset for a commit is defined as the difference
between its corrected commit date and actual commit date.
Storing corrected commit date requires sizeof(timestamp_t) bytes, which
in most cases is 64 bits (uintmax_t). However, corrected commit date
offsets can be safely stored using only 32-bits. This halves the size
of GDAT chunk, which is a reduction of around 6% in the size of
commit-graph file.
However, using offsets be problematic if a commit is malformed but valid
and has committer date of 0 Unix time, as the offset would be the same
as corrected commit date and thus require 64-bits to be stored properly.
While Git does not write out offsets at this stage, Git stores the
corrected commit dates in member generation of struct commit_graph_data.
It will begin writing commit date offsets with the introduction of
generation data chunk.
Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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In a preparatory step for introducing corrected commit dates, let's
return timestamp_t values from commit_graph_generation(), use
timestamp_t for local variables and define GENERATION_NUMBER_INFINITY
as (2 ^ 63 - 1) instead.
We rename GENERATION_NUMBER_MAX to GENERATION_NUMBER_V1_MAX to
represent the largest topological level we can store in the commit data
chunk.
With corrected commit dates implemented, we will have two such *_MAX
variables to denote the largest offset and largest topological level
that can be stored.
Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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In a later commit we will introduce corrected commit date as the
generation number v2. Corrected commit dates will be stored in the new
seperate Generation Data chunk. However, to ensure backwards
compatibility with "Old" Git we need to continue to write generation
number v1 (topological levels) to the commit data chunk. Thus, we need
to compute and store both versions of generation numbers to write the
commit-graph file.
Therefore, let's introduce a commit-slab `topo_level_slab` to store
topological levels; corrected commit date will be stored in the member
`generation` of struct commit_graph_data.
The macros `GENERATION_NUMBER_INFINITY` and `GENERATION_NUMBER_ZERO`
mark commits not in the commit-graph file and commits written by a
version of Git that did not compute generation numbers respectively.
Generation numbers are computed identically for both kinds of commits.
A "slab-miss" should return `GENERATION_NUMBER_INFINITY` as the commit
is not in the commit-graph file. However, since the slab is
zero-initialized, it returns 0 (or rather `GENERATION_NUMBER_ZERO`).
Thus, we no longer need to check if the topological level of a commit is
`GENERATION_NUMBER_INFINITY`.
We will add a pointer to the slab in `struct write_commit_graph_context`
and `struct commit_graph` to populate the slab in
`fill_commit_graph_info` if the commit has a pre-computed topological
level as in case of split commit-graphs.
Signed-off-by: Abhishek Kumar <abhishekkumar8222@gmail.com>
Reviewed-by: Taylor Blau <me@ttaylorr.com>
Reviewed-by: Derrick Stolee <dstolee@microsoft.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>
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