Update internal usage of `git_transfer_progress` to
`git_indexer_progreses`.

`git_time_monotonic` was added so that non-native bindings like rugged
could get high-resolution timing for benchmarking.  However, this is
outside the scope of libgit2 *and* rugged decided not to use this
function in the first place.

Google suggests that absolutely _nobody_ is using this function and we
don't want to be in the benchmarking business.  Remove the function.

`git_stream_register_tls` is now deprecated; mark it in an if guard with
the deprecation.

This should not be included in `deprecated.h` since it is an uncommonly
used `sys` header file.

Since we now always build the library with cdecl calling conventions,
our callbacks should be decorated as such so that users will not be able
to provide callbacks defined with other calling conventions.

The `GIT_CALLBACK` macro will inject the `__cdecl` attribute as
appropriate.

git_object_t is the future; update the public API to use it.  This will
also ensure that we can build our tests which make use of the old API
without modification (and without compiler warnings).

Accept an enum (`git_stream_t`) during custom stream registration that
indicates whether the registration structure should be used for standard
(non-TLS) streams or TLS streams.

Update the new stream registration API to be `git_stream_register`
which takes a registration structure and a TLS boolean.  This allows
callers to register non-TLS streams as well as TLS streams.

Provide `git_stream_register_tls` that takes just the init callback for
backward compatibliity.

Introduce `git_tls_stream_wrap` which will take an existing `stream`
with an already connected socket and begin speaking TLS on top of it.
This is useful if you've built a connection to a proxy server and you
wish to begin CONNECT over it to tunnel a TLS connection.

Also update the pluggable TLS stream layer so that it can accept a
registration structure that provides an `init` and `wrap` function,
instead of a single initialization function.