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authorWarren Weckesser <warren.weckesser@gmail.com>2013-11-02 12:41:31 -0400
committerWarren Weckesser <warren.weckesser@gmail.com>2013-11-02 12:41:31 -0400
commit6ced92b72d3c43f0fcd1e680ea0df70ef1779855 (patch)
treeed39560a8cdd8086f2605db71ed6547b4748570c
parenta73f729e683b89f74fe076cb2e8f17a4168ece69 (diff)
downloadnumpy-6ced92b72d3c43f0fcd1e680ea0df70ef1779855.tar.gz
ENH: lib: Rewrite vander: make it faster, and add an option to specify the order of the powers (either decreasing or increasing).
-rw-r--r--numpy/lib/tests/test_twodim_base.py36
-rw-r--r--numpy/lib/twodim_base.py48
2 files changed, 69 insertions, 15 deletions
diff --git a/numpy/lib/tests/test_twodim_base.py b/numpy/lib/tests/test_twodim_base.py
index 5e3c9dd02..89ec68a7d 100644
--- a/numpy/lib/tests/test_twodim_base.py
+++ b/numpy/lib/tests/test_twodim_base.py
@@ -9,7 +9,7 @@ from numpy.testing import (TestCase, run_module_suite, assert_equal,
from numpy import (arange, rot90, add, fliplr, flipud, zeros, ones, eye,
array, diag, histogram2d, tri, mask_indices, triu_indices,
- triu_indices_from, tril_indices, tril_indices_from)
+ triu_indices_from, tril_indices, tril_indices_from, vander)
import numpy as np
from numpy.compat import asbytes, asbytes_nested
@@ -370,5 +370,39 @@ class TestTriuIndicesFrom(object):
assert_raises(ValueError, triu_indices_from, np.ones((2, 3)))
+class TestVander(object):
+ def test_basic(self):
+ c = np.array([0,1,-2, 3])
+ v = vander(c)
+ powers = np.array([[ 0, 0, 0, 0, 1],
+ [ 1, 1, 1, 1, 1],
+ [16, -8, 4, -2, 1],
+ [81, 27, 9, 3, 1]])
+ # Check default value of N:
+ yield (assert_array_equal, v, powers[:, 1:])
+ # Check a range of N values, including 0 and 5 (greater than default)
+ m = powers.shape[1]
+ for n in range(6):
+ v = vander(c, N=n)
+ yield (assert_array_equal, v, powers[:, m-n:m])
+
+ def test_dtypes(self):
+ c = array([11, -12, 13], dtype=np.int8)
+ v = vander(c)
+ expected = np.array([[121, 11, 1],
+ [144, -12, 1],
+ [169, 13, 1]])
+ yield (assert_array_equal, v, expected)
+
+ c = array([1.0+1j, 1.0-1j])
+ v = vander(c, N=3)
+ expected = np.array([[ 2j, 1+1j, 1],
+ [-2j, 1-1j, 1]])
+ # The data is floating point, but the values are small integers,
+ # so assert_array_equal *should* be safe here (rather than, say,
+ # assert_array_almost_equal).
+ yield (assert_array_equal, v, expected)
+
+
if __name__ == "__main__":
run_module_suite()
diff --git a/numpy/lib/twodim_base.py b/numpy/lib/twodim_base.py
index 91df1f4f8..cdb0a4f5b 100644
--- a/numpy/lib/twodim_base.py
+++ b/numpy/lib/twodim_base.py
@@ -450,13 +450,15 @@ def triu(m, k=0):
out = multiply((1 - tri(m.shape[0], m.shape[1], k - 1, dtype=m.dtype)), m)
return out
-# borrowed from John Hunter and matplotlib
-def vander(x, N=None):
+# Originally borrowed from John Hunter and matplotlib
+def vander(x, N=None, order='decreasing'):
"""
- Generate a Van der Monde matrix.
+ Generate a Vandermonde matrix.
- The columns of the output matrix are decreasing powers of the input
- vector. Specifically, the `i`-th output column is the input vector
+ The columns of the output matrix are powers of the input vector. The
+ order of the powers is determined by the `order` argument, either
+ "decreasing" (the default) or "increasing". Specifically, when
+ `order` is "decreasing", the `i`-th output column is the input vector
raised element-wise to the power of ``N - i - 1``. Such a matrix with
a geometric progression in each row is named for Alexandre-Theophile
Vandermonde.
@@ -466,14 +468,18 @@ def vander(x, N=None):
x : array_like
1-D input array.
N : int, optional
- Order of (number of columns in) the output. If `N` is not specified,
- a square array is returned (``N = len(x)``).
+ Number of columns in the output. If `N` is not specified, a square
+ array is returned (``N = len(x)``).
+ order : str, optional
+ Order of the powers of the columns. Must be either 'decreasing'
+ (the default) or 'increasing'.
Returns
-------
out : ndarray
- Van der Monde matrix of order `N`. The first column is ``x^(N-1)``,
- the second ``x^(N-2)`` and so forth.
+ Vandermonde matrix. If `order` is "decreasing", the first column is
+ ``x^(N-1)``, the second ``x^(N-2)`` and so forth. If `order` is
+ "increasing", the columns are ``x^0, x^1, ..., x^(N-1)``.
Examples
--------
@@ -497,6 +503,11 @@ def vander(x, N=None):
[ 8, 4, 2, 1],
[ 27, 9, 3, 1],
[125, 25, 5, 1]])
+ >>> np.vander(x, order='increasing')
+ array([[ 1, 1, 1, 1],
+ [ 1, 2, 4, 8],
+ [ 1, 3, 9, 27],
+ [ 1, 5, 25, 125]])
The determinant of a square Vandermonde matrix is the product
of the differences between the values of the input vector:
@@ -507,13 +518,22 @@ def vander(x, N=None):
48
"""
+ if order not in ['decreasing', 'increasing']:
+ raise ValueError("Invalid order %r; order must be either "
+ "'decreasing' or 'increasing'." % (order,))
x = asarray(x)
+ if x.ndim != 1:
+ raise ValueError("x must be a one-dimensional array or sequence.")
if N is None:
- N=len(x)
- X = ones( (len(x), N), x.dtype)
- for i in range(N - 1):
- X[:, i] = x**(N - i - 1)
- return X
+ N = len(x)
+ if order == "decreasing":
+ powers = arange(N-1, -1, -1)
+ else:
+ powers = arange(N)
+
+ V = x.reshape(-1, 1) ** powers
+
+ return V
def histogram2d(x, y, bins=10, range=None, normed=False, weights=None):