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* DOC: merge wiki edits. Add percentile to statistics routines (ML suggestion).Ralf Gommers2012-07-072-2/+4
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* DOC: merge wiki docs - edits under doc/.Ralf Gommers2012-07-076-18/+51
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* DOC: update HOWTO_RELEASE document.Ralf Gommers2012-06-261-20/+33
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* BUG: Fix boolean indexing to previous behavior by adding an additional check ↵Travis E. Oliphant2012-06-211-6/+8
| | | | before using the new code path. Add tests.
* Remove maskna API from ndarray, and all (and only) the code supporting itNathaniel J. Smith2012-06-167-1043/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | The original masked-NA-NEP branch contained a large number of changes in addition to the core NA support. For example: - ufunc.__call__ support for where= argument - nditer support for arbitrary masks (in support of where=) - ufunc.reduce support for simultaneous reduction over multiple axes - a new "array assignment API" - ndarray.diagonal() returning a view in all cases - bug-fixes in __array_priority__ handling - datetime test changes etc. There's no consensus yet on what should be done with the maskna-related part of this branch, but the rest is generally useful and uncontroversial, so the goal of this branch is to identify exactly which code changes are involved in maskna support. The basic strategy used to create this patch was: - Remove the new masking-related fields from ndarray, so no arrays are masked - Go through and remove all the code that this makes dead/inaccessible/irrelevant, in a largely mechanical fashion. So for example, if I saw 'if (PyArray_HASMASK(a)) { ... }' then that whole block was obviously just dead code if no arrays have masks, and I removed it. Likewise for function arguments like skipna that are useless if there aren't any NAs to skip. This changed the signature of a number of functions that were newly exposed in the numpy public API. I've removed all such functions from the public API, since releasing them with the NA-less signature in 1.7 would create pointless compatibility hassles later if and when we add back the NA-related functionality. Most such functions are removed by this commit; the exception is PyArray_ReduceWrapper, which requires more extensive surgery, and will be handled in followup commits. I also removed the new ndarray.setasflat method. Reason: a comment noted that the only reason this was added was to allow easier testing of one branch of PyArray_CopyAsFlat. That branch is now the main branch, so that isn't an issue. Nonetheless this function is arguably useful, so perhaps it should have remained, but I judged that since numpy's API is already hairier than we would like, it's not a good idea to add extra hair "just in case". (Also AFAICT the test for this method in test_maskna was actually incorrect, as noted here: https://github.com/njsmith/numpyNEP/blob/master/numpyNEP.py so I'm not confident that it ever worked in master, though I haven't had a chance to follow-up on this.) I also removed numpy.count_reduce_items, since without skipna it became trivial. I believe that these are the only exceptions to the "remove dead code" strategy.
* Merge pull request #298 from dlaxalde/sphinxext/cleanupTravis E. Oliphant2012-06-082-16/+5
|\ | | | | sphinxext cleanup
| * sphinxext: remove mention of old files in LICENSE.txtDenis Laxalde2012-06-071-5/+2
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| * sphinxext: some cleanup in setup.pyDenis Laxalde2012-06-071-11/+3
| | | | | | | | | | | | | | - remove obsolete entry_points (the corresponding code was removed in 08e85c1820f8502e2a5009da4d3d89c6462a911b). - drop setuptools import - adjust setup() argument to conform with distutils format
* | Merge branch 'master' into clean-up-diagonalNathaniel J. Smith2012-06-064-3/+120
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| * DOC: Remove duplicate unique links in HOWTO_DOCUMENT.Stefan van der Walt2012-05-301-3/+3
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| * MAINT: port release notes and release script changes from 1.6.x.Ralf Gommers2012-05-203-0/+117
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* | Merge branch 'master' into clean-up-diagonalNathaniel J. Smith2012-05-191-0/+4
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| * Merge pull request #268 from FrancescAlted/masterMark2012-05-181-0/+4
| |\ | | | | | | The docs should stress that functions that create arrays actually steals a reference to dtype descriptor
| | * Stress that all array creation C functions steals a reference to descr.Francesc Alted2012-05-041-0/+4
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* | | Typo fixNathaniel J. Smith2012-05-171-1/+1
| | | | | | | | | | | | Thanks to Travis for catching it.
* | | Document the PyArray_Diagonal transition scheme.Nathaniel J. Smith2012-05-161-29/+35
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* | | Consolidate all array writeability checking in new PyArray_RequireWriteableNathaniel J. Smith2012-05-151-0/+13
|/ / | | | | | | | | | | | | | | | | This is mostly a code cleanup, but it does have a user-visible effect in that attempting to write to a unwriteable array now consistently raises ValueError. (It used to randomly raise either ValueError or RuntimeError.) Passes numpy.test("full").
* | NEP: Add some details about how existing C-API access interacts with NAMark Wiebe2012-05-101-0/+77
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* | DOC: verbosity -> verbose in testing guidelinesDenis Laxalde2012-05-101-14/+14
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* | REL: change Sphinx version in release script to 1.1.3.Ralf Gommers2012-05-041-1/+1
|/ | | | | | | | Version 1.0.4 was used till now, but has become too old. New version gives far fewer warnings and thereby increases the reference guide with O(100) pages that previously got lost. Also update current Cython version number.
* DOC: Add datetime to the changed items in the release notes.Charles Harris2012-05-011-0/+7
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* DOC: Add a section documenting 1.6/1.7 datetime64 differencesMark Wiebe2012-05-011-0/+127
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* DOC: fix link and add explanation on how to run examples.Ralf Gommers2012-04-181-2/+16
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* DOC: Update documentation and release notes about C-API deprecationsMark Wiebe2012-04-063-5/+58
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* ENH: Add module containing functions for padding n-dimensional arrays.tim cera2012-04-043-22/+44
| | | | | | | | | | | | | The various padding functions are exposed as options to a public 'pad' function. Example: pad(a, 5, mode='mean') Current modes are 'constant', 'edge', 'linear_ramp', 'maximum', 'mean', 'median', 'minimum', 'reflect', 'symmetric', 'wrap', and <function> This commit includes unit tests and doctests and is based on feature request ticket #655.
* ENH: Add 'sorter' argument to searchsorted.Bryan Van de Ven2012-04-041-0/+6
| | | | | | | | The new argument allows one to search an argsorted array by passing in the result of argsorting the array as the 'sorter' argument. For example searchsorted(a, sorter=a.argsort)
* DOC: label datetime support as experimental. Closes #2072.Ralf Gommers2012-03-302-0/+11
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* DOC: label the current NA implementation as experimental in 1.7.xRalf Gommers2012-03-302-0/+10
| | | | This has been extensively discussed on the mailing list. See #2072.
* MAINT: port few missing changes to 1.6.0 release notes from 1.6.x branch.Ralf Gommers2012-03-261-6/+0
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* DOC: generate links to source codePauli Virtanen2012-03-112-0/+143
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* Merge pull request #219 from mwiebe/test_warn_paramRalf Gommers2012-03-062-7/+10
|\ | | | | | | | | | | Add parameters in NoseTester constructor as well as in NoseTester.test() to control which warnings raise an error. An explicit difference is made between the master branch and release branches. This was mentioned on the ML: http://thread.gmane.org/gmane.comp.python.numeric.general/48210
| * TST: add some string kw options to simplify switching NoseTester behavior.Ralf Gommers2012-03-041-2/+1
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| * TST: add "raise on warning" behavior to NoseTester constructor.Ralf Gommers2012-03-042-7/+11
| | | | | | | | | | Also document that behavior has to be switched for a release, and remove comments on turning on deprecation warnings that don't apply anymore.
* | ENH: Made "isclose()" NA-aware, added release note and versionadded.Joe Kington2012-03-041-0/+7
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* Fix typo (all ready -> already)Jason Grout2012-03-041-1/+1
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* DOC: merge wiki doc edits.Ralf Gommers2012-03-033-7/+9
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* DOC: Add a C style guide.Charles Harris2012-03-031-0/+220
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* DOC: add to release HOWTO that the C API version should be updated.Ralf Gommers2012-02-051-4/+13
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* DOC: clarify numpy version for removal, document sed script better.Charles Harris2012-02-041-1/+1
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* STY: Fix up the 2.0 (1.7) release notes.Charles Harris2012-02-041-5/+11
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* DEP: Deprecate the old_defines.h header and the macros therein.Charles Harris2012-02-041-5/+16
| | | | | | The old_defines.h file is no longer included in ndarrayobject.h, but instead in the npy_deprecated_api.h file. It is no longer part of the numpy build and its deprecation is noted in the release notes.
* DOC: numpybook - Replace macro names in old_defines.h with new.Charles Harris2012-02-041-26/+26
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* DOC: Replace references to macros in old_defines with new.Charles Harris2012-02-046-133/+21
| | | | | Also remove swig support for numpy < 1 from numpy.i since it expects the old macros.
* STY: Replace more found macros in old_defines.h with new.Charles Harris2012-02-041-2/+2
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* DOC: Document macro changes in release notes.Charles Harris2012-01-271-0/+9
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* DOC: Improve numpy reference documentation of polynomial classes.Charles Harris2012-01-093-16/+26
| | | | | Add more explanation of what happens in polynomial substitution and also of its use in casting between types. Clean up some rst glitches.
* DOC: Move removing deprecated imports note to deprecation section.Charles Harris2012-01-091-2/+2
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* DOC: Document new polynomial package functionality in the release notes.Charles Harris2012-01-091-1/+22
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* DOC: Document the use of the polynomial convenience classes.Charles Harris2012-01-091-10/+337
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* DOC: Lower toc number of levels.Charles Harris2012-01-091-1/+1
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