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# Compatibility module containing deprecated names
import multiarray as mu
import umath as um
import numerictypes as nt
from numeric import asarray, array, correlate, outer
import sys
#Use this to add a new axis to an array
#compatibility only
NewAxis = None
#deprecated
UFuncType = type(um.sin)
ArrayType = mu.ndarray
LittleEndian = (sys.byteorder == 'little')
# backward compatible names from old Precision.py
Character = nt.string
UnsignedInt8 = nt.uint8
UnsignedInt16 = nt.uint16
UnsignedInt32 = nt.uint32
UnsignedInt = nt.uint
typecodes = {'Character':'S1', 'Integer':'bhilqp', 'UnsignedInteger':'BHILQP',
'Float':'fdg', 'Complex':'FDG'}
def sarray(a, dtype=None, copy=0):
return array(a, dtype, copy)
try:
UnsignedInt64 = nt.uint64
UnsignedInt128 = nt.uint128
except AttributeError:
pass
Int8 = nt.int8
Int16 = nt.int16
Int32 = nt.int32
try:
Int64 = nt.int64
Int128 = nt.int128
except AttributeError:
pass
Int0 = nt.intp
Float0 = nt.float
Float = nt.float
Complex0 = nt.complex
Complex = nt.complex
PyObject = nt.object
Float32 = nt.float32
Float64 = nt.float64
try:
Float128 = nt.float128
except AttributeError:
pass
Complex32 = nt.complex64
Complex64 = nt.complex128
try:
Complex128 = nt.complex256
except AttributeError:
pass
# backward compatibility
arrayrange = mu.arange
cross_correlate = correlate
# deprecated names
matrixmultiply = mu.dot
outerproduct=outer
innerproduct=mu.inner
from cPickle import dump, dumps
# functions that are now methods
def take(a, indices, axis=0):
a = asarray(a)
return a.take(indices, axis)
def reshape(a, newshape):
"""Change the shape of a to newshape. Return a new view object.
"""
return asarray(a).reshape(newshape)
def choose(a, choices):
a = asarray(a)
return a.choose(choices)
def repeat(a, repeats, axis=0):
"""repeat elements of a repeats times along axis
repeats is a sequence of length a.shape[axis]
telling how many times to repeat each element.
If repeats is an integer, it is interpreted as
a tuple of length a.shape[axis] containing repeats.
The argument a can be anything array(a) will accept.
"""
a = array(a, copy=0)
return a.repeat(repeats, axis)
def put (a, ind, v):
"""put(a, ind, v) results in a[n] = v[n] for all n in ind
If v is shorter than mask it will be repeated as necessary.
In particular v can be a scalar or length 1 array.
The routine put is the equivalent of the following (although the loop
is in C for speed):
ind = array(indices, copy=0)
v = array(values, copy=0).astype(a, a.dtype)
for i in ind: a.flat[i] = v[i]
a must be a contiguous Numeric array.
"""
a = array(a,copy=0)
v = array(v,copy=0)
return a.put(a, ind, v.astype(a.dtype))
def putmask (a, mask, v):
"""putmask(a, mask, v) results in a = v for all places mask is true.
If v is shorter than mask it will be repeated as necessary.
In particular v can be a scalar or length 1 array.
"""
return a.putmask(mask, v)
def swapaxes(a, axis1, axis2):
"""swapaxes(a, axis1, axis2) returns array a with axis1 and axis2
interchanged.
"""
a = array(a, copy=0)
return a.swapaxes(axis1, axis2)
def transpose(a, axes=None):
"""transpose(a, axes=None) returns array with dimensions permuted
according to axes. If axes is None (default) returns array with
dimensions reversed.
"""
a = array(a,copy=0)
return a.transpose(axes)
def sort(a, axis=-1):
"""sort(a,axis=-1) returns array with elements sorted along given axis.
"""
a = array(a, copy=0)
return a.sort(axis)
def argsort(a, axis=-1):
"""argsort(a,axis=-1) return the indices into a of the sorted array
along the given axis, so that take(a,result,axis) is the sorted array.
"""
a = array(a, copy=0)
return a.argsort(axis)
def argmax(a, axis=-1):
"""argmax(a,axis=-1) returns the indices to the maximum value of the
1-D arrays along the given axis.
"""
a = array(a, copy=0)
return a.argmax(axis)
def argmin(a, axis=-1):
"""argmin(a,axis=-1) returns the indices to the minimum value of the
1-D arrays along the given axis.
"""
a = array(a,copy=0)
return a.argmin(axis)
def searchsorted(a, v):
"""searchsorted(a, v)
"""
a = array(a,copy=0)
return a.searchsorted(v)
def resize(a, new_shape):
"""resize(a,new_shape) returns a new array with the specified shape.
The original array's total size can be any size. It
fills the new array with repeated copies of a.
"""
a = ravel(a)
Na = len(a)
if not Na: return zeros(new_shape, a.dtypechar)
total_size = up.multiply.reduce(new_shape)
n_copies = pyint(total_size / Na)
extra = total_size % Na
if extra != 0:
n_copies = n_copies+1
extra = Na-extra
a = concatenate( (a,)*n_copies)
if extra > 0:
a = a[:-extra]
return reshape(a, new_shape)
def diagonal(a, offset=0, axis1=0, axis2=1):
"""diagonal(a, offset=0, axis1=0, axis2=1) returns the given diagonals
defined by the last two dimensions of the array.
"""
return asarray(a).diagonal(offset, axis1, axis2)
## a = asarray(a)
## nd = len(a.shape)
## new_axes = range(nd)
## if (axis1 < 0): axis1 += nd
## if (axis2 < 0): axis2 += nd
## try:
## new_axes.remove(axis1)
## new_axes.remove(axis2)
## except ValueError:
## raise ValueError, "axis1(=%d) and axis2(=%d) must be different and within range." % (axis1, axis2)
## new_axes = new_axes + [axis1, axis2] ### insert at the end, not the beginning
## a = transpose(a, new_axes)
## s = a.shape
## rank = len(s)
## if rank == 2:
## n1 = s[0]
## n2 = s[1]
## n = n1 * n2
## s = (n,)
## a = reshape(a, s)
## if offset < 0:
## return take(a, range(- n2 * offset, min(n2, n1+offset) *
## (n2+1) - n2 * offset, n2+1), axis=0)
## else:
## return take(a, range(offset, min(n1, n2-offset) *
## (n2+1) + offset, n2+1), axis=0)
## else:
## my_diagonal = []
## for i in range(s[0]):
## my_diagonal.append(diagonal(a[i], offset, rank-3, rank-2)) ###
## return array(my_diagonal)
def trace(a, offset=0, axis1=0, axis2=1, rtype=None):
"""trace(a,offset=0, axis1=0, axis2=1) returns the sum along diagonals
(defined by the last two dimenions) of the array.
"""
return asarray(a).trace(offset, axis1, axis2, rtype)
def ravel(m):
"""ravel(m) returns a 1d array corresponding to all the elements of it's
argument.
"""
return asarray(m).ravel()
def nonzero(a):
"""nonzero(a) returns the indices of the elements of a which are not zero,
a must be 1d
"""
return asarray(a).nonzero()
## return repeat(arange(len(a)), not_equal(a, 0))
def shape(a):
"""shape(a) returns the shape of a (as a function call which
also works on nested sequences).
"""
return asarray(a).shape
def compress(condition, m, axis=-1):
"""compress(condition, x, axis=-1) = those elements of x corresponding
to those elements of condition that are "true". condition must be the
same size as the given dimension of x."""
return asarray(m).compress(condition, axis)
def clip(m, m_min, m_max):
"""clip(m, m_min, m_max) = every entry in m that is less than m_min is
replaced by m_min, and every entry greater than m_max is replaced by
m_max.
"""
return asarray(m).clip(m_min, m_max)
## selector = less(m, m_min)+2*greater(m, m_max)
## return choose(selector, (m, m_min, m_max))
def sum (x, axis=0, rtype=None):
"""Sum the array over the given axis.
"""
return asarray(x).sum(axis, rtype)
def product (x, axis=0, rtype=None):
"""Product of the array elements over the given axis."""
return asarray(x).prod(axis, rtype)
def sometrue (x, axis=0):
"""Perform a logical_or over the given axis."""
return asarray(x).any(axis)
def alltrue (x, axis=0):
"""Perform a logical_and over the given axis."""
return asarray(x).all(axis)
def any(x,axis=None):
"""Return true if any elements of x are true: sometrue(ravel(x))
"""
return ravel(x).any(axis)
def all(x,axis=None):
"""Return true if all elements of x are true: alltrue(ravel(x))
"""
return ravel(x).all(axis)
def cumsum (x, axis=0, rtype=None):
"""Sum the array over the given axis."""
return asarray(x).cumsum(axis, rtype)
def cumproduct (x, axis=0, rtype=None):
"""Sum the array over the given axis."""
return asarray(x).cumprod(axis, rtype)
def around(m, decimals=0):
"""around(m, decimals=0) \
Round in the same way as standard python performs rounding. Returns
always a float.
"""
return asarray(m).round(decimals)
## m = asarray(m)
## s = sign(m)
## if decimals:
## m = absolute(m*10.**decimals)
## else:
## m = absolute(m)
## rem = m-asarray(m).astype(intp)
## m = where(less(rem,0.5), floor(m), ceil(m))
## # convert back
## if decimals:
## m = m*s/(10.**decimals)
## else:
## m = m*s
## return m
def sign(m):
"""sign(m) gives an array with shape of m with elements defined by sign
function: where m is less than 0 return -1, where m greater than 0, a=1,
elsewhere a=0.
"""
return asarray(m).sign()
## m = asarray(m)
## return zeros(shape(m))-less(m,0)+greater(m,0)
def ndim(a):
try:
return a.ndim
except AttributeError:
return asarray(a).ndim
def rank (a):
"""Get the rank of sequence a (the number of dimensions, not a matrix rank)
The rank of a scalar is zero.
"""
try:
return a.ndim
except:
return asarray(a).ndim
def shape (a):
"Get the shape of sequence a"
try:
return a.shape
except:
return asarray(a).shape
def size (a, axis=None):
"Get the number of elements in sequence a, or along a certain axis."
a = asarray(a)
if axis is None:
return a.size
else:
return a.shape[axis]
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