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| author | Jim McCusker <jmccusker@5amsolutions.com> | 2014-11-21 01:51:35 -0500 |
|---|---|---|
| committer | Jim McCusker <jmccusker@5amsolutions.com> | 2014-11-21 01:51:35 -0500 |
| commit | 86e324e4092e5951c9031c041f5ea16ad59a0b47 (patch) | |
| tree | e6523ca2f83fd66a5ccec7005d7e6edb305a289e /examples | |
| parent | a69c22afed817c932518542bf69be7cd19a7d824 (diff) | |
| download | rdflib-86e324e4092e5951c9031c041f5ea16ad59a0b47.tar.gz | |
serial loading of ontologies.
Diffstat (limited to 'examples')
| -rw-r--r-- | examples/graph_digest_benchmark.py | 11 |
1 files changed, 8 insertions, 3 deletions
diff --git a/examples/graph_digest_benchmark.py b/examples/graph_digest_benchmark.py index dca8e91f..c3d69239 100644 --- a/examples/graph_digest_benchmark.py +++ b/examples/graph_digest_benchmark.py @@ -63,10 +63,9 @@ def bioportal_benchmark(apikey, output_file, threads): try: while True: stats = q.get() + og = stats['graph'] print stats['ontology'], stats['download_url'] try: - og = Graph() - og.load(stats['download_url']+"?apikey=%s"%apikey) ig = to_isomorphic(og) graph_digest = ig.graph_digest(stats) except Exception as e: @@ -87,7 +86,13 @@ def bioportal_benchmark(apikey, output_file, threads): "ontology": title, "download_url": download }) - tasks.put(stats) + try: + og = Graph() + og.load(stats['download_url']+"?apikey=%s"%apikey) + stats['graph'] = og + tasks.put(stats) + except Exception as e: + print ontology, e tasks.close() written_tasks = 0 while written_tasks < task_count: |